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UTI and Menopause: Estrogen May Improve Recurrent UTI


By Krystal Thomas-White PhD

Last Update On: 27 Nov 2024

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6 mins

For many people, UTI and menopause go hand-in-hand. But why is post-menopausal UTI a thing? Can estrogen help for recurrent UTI? And is estrogen cream safe?

We get a lot of questions about hormones, hormone therapy and the possible connection to recurrent UTIs.

Many people who reach out to us have noted they experience UTI symptoms at certain times of their menstrual cycle or that the frequency of UTIs increased at the onset of menopause. Others found starting or stopping the contraceptive pill had an impact.

So is there a link between hormones and recurrent UTI, and can we do anything about it?

Jump To Section:

  • UTI and menopause: The vaginal and urinary microbiomes. >>>>
  • How a healthy vaginal microbiome impacts recurrent UTI. >>>>
  • Recurrent UTI and menopause may be linked by estrogen levels. >>>>
  • Estrogen vs. antibiotics for UTIs. >>>>
  • How estrogen impacts the bladder. >>>>

Why Did My Doctor Prescribe Hormones For My UTIs?

You might be surprised to find out that if you are post-menopausal and have recurrent UTIs, your doctor might prescribe hormone replacement therapy (HRT).

This could be estrogen in either systemic form (a pill that is taken orally) or topical form (a cream that is applied inside the vagina).

Why would estrogen help when it comes to UTI and Menopause? Let’s start with how the vagina and urinary tract are linked.

UTI And Menopause: The Vaginal And Urinary Microbiomes

The relationship between UTI and menopause has a few layers. First, let’s just confirm something many people are not yet aware of…

Contrary to long-held beliefs, urine is not sterile. The bladder has its own unique microbiome, even in a healthy state.

To be fair, the discovery of the female urinary microbiome was fairly recent, but the consequences of this research are already making ripples through everything we thought we knew about UTIs.

When we mention that the bladder has its own microbiome, most people think of what they have learned about the gut microbiome. This conjures images of a complex network of millions of bacteria all living and working together.

The bladder is very different from the gut; its function is to store and remove waste products.

It is a low biomass niche, meaning instead of billions of bacteria, a healthy person’s bladder may only have a few thousand. And instead of a community of different bacteria, a healthy person tends to have one or two dominant bacteria.

“You could think of the gut microbiome kind of like a rainforest, filled to the brim with different species of plants and animals. If the gut is a rainforest, the bladder is a desert. It has a microbiome, but it’s low biomass, meaning there are relatively few bacteria to be found there.”

UTI And Menopause: The Interconnected Urinary And Vaginal Microbiomes

Based on the knowledge that the bladder and the vagina have their own microbiomes, you may be asking yourself whether the two can influence one another.

It does look like the bladder and vaginal microbiomes are interconnected. The same types of bacteria are found in both anatomical sites (Lactobacillus, Gardnerella, Staphylococcus, Streptococcus, etc).

And the exact same strain of bacteria have been found in both sites of individual females. Therefore it is possible for a population of Lactobacillus to live in both the vagina and bladder at the exact same point in time.

Read about Cindy’s experience of UTI during menopause here.

The Microbial Communities Of The Urinary Tract, Vagina And Gut

The urinary and vaginal microbiome are connected. The gut microbiome has very little connection.
While there is crossover between the bladder and the vaginal microbiomes, there is very little crossover of either with the gut microbiome.

This means that at the species level it is possible that these microbiomes are connected, but when we look at the microbial community of each location as a whole, we still find differences.

Krystal Thomas-White PhD, urinary microbiome scientist“Talking about finding the same strains of bacteria in both the vagina and the bladder is like saying that we found a species of evergreen tree growing in the lush river valley and high up on the dry mountainside. We all know that there are other plants that will not normally grow in both environments. So does the presence of the evergreen tell us more about the tree, or the environment in which it grows? And can we take those same lessons and apply it to an invasive species?”

These are the types of questions we’re still trying to answer, with regard to the urinary microbiome.

Watch our video interview with Dr. Krystal Thomas-White to learn more about the vaginal microbiome.

How Organisms Move From Your Gut To Your Urethra

As you may know, the main theory about how recurrent UTIs occur, goes something like this…

Organisms that exist within the digestive tract can end up very close to the opening of the vagina, thanks to our bowel movements and wiping habits.

Given the proximity, it can be very easy for these organisms to attempt to colonize the vagina.

Proximity of the vagina, urethra and anus

If they successfully colonize the vagina, they’re then in a good position to do the same in the urinary tract.

It may be the case for some people, that an imbalance in the vaginal microbiome causes a continuous flow-on effect to the urinary tract, resulting in frequent UTIs.

How A Healthy Vaginal Microbiome Impacts Recurrent UTI

There are a few different types of bacteria that live in the vaginal tract. The most common are Lactobacillus species such as Lactobacillus crispatus, Lactobacillus gasseri, Lactobacillus jensenii, Lactobacillus iners, however other Lactobacillus species can routinely be detected.

Other organisms are also commonly found, and include Gardnerella vaginalis, Corynebacterium, Aerococcus, Atopobium, Streptococcus, Staphylococcus, Peptostreptococcus, Prevotella, Pseudomonas, Megasphaera, Sneathia, and many others .

Which Bacteria Are Good And Which Are Bad?

Vaginal microbiome: Lactobacillus and E. coli
Bacteria found in the vagina: Corynebacterium and Streptococcus
Bacteria found in the vagina: Staphylococcus and Gardnerella

There is debate in the scientific community whether any of these bacteria can be considered pathogenic (disease-causing) in the vaginal tract.

This is a fairly new field, but is seems that healthy women with different ethnic backgrounds tend to have different vaginal bacteria, suggesting that there is a wide range of microbiome profiles for healthy women. Meaning that there isn’t one single bacteria or bacterial community that is right for everyone.

However, the prevailing medical dogma still considers the most beneficial of these bacteria to be Lactobacillus – those listed above.

These bacteria grow to high numbers and produce lactic acid and hydrogen peroxide as a byproduct. These byproducts make it really hard for uropathogens, such as E. coli, to grow in the vagina.

This means, when Lactobacillus is present in high enough numbers, E. coli cannot ascend from the gut into the vagina. If E. coli can’t get that far, then it therefore isn’t anywhere near the urethra, and is less likely to reach the bladder.

You can learn more about the current state of your vaginal microbiome with a vaginal swab test that looks at the entire microbiome. Companies like Evvy provide a detailed report about the microbiome community type and what this could mean for healing.

So where does estrogen come in? How are UTI and menopause linked?

It is thought that estrogen increases the stores of glycogen on the surface of the vaginal epithelial cells (vaginal lining).

Glycogen acts as a food source for Lactobacilli. The more glycogen that is available, the more the Lactobacilli eat, and the more they multiply. And as mentioned above, abundant Lactobacilli provide a lactic acid rich, protective environment.

UTI and menopause - estrogen therapy
UTI and menopause - estrogen reduction

When females go through menopause and the levels of estrogen are reduced, this food source also diminishes, and so do the Lactobacilli and accompanying protective acid.

UTI And Menopause May Be Directly Linked To Lactobacillus In The Vaginal Microbiome

What happens after menopause? Studies have shown that post-menopausal females tend to lose Lactobacillus and their vaginal microbiomes become more diverse2-4.

This change can be influenced by Hormone Replacement Therapy (HRT).

Studies have shown that post-menopausal females who have been on HRT for years tend to have more of a Lactobacillus dominant community compared to females of the same age not on HRT.

Estrogen vs. Antibiotics For UTIs

In the late 90s and early 2000s, a series of studies was done around UTI and menopause. They compared estrogen therapy (applied vaginally) to prophylactic antibiotics (preventative antibiotics every day).

The studies looked at which therapy was more effective at preventing recurrent UTIs after menopause.

One study in particular looked at the use of topical estrogen cream vs. prophylactic antibiotics in post-menopausal females.

This study found that without any treatment, the participants experienced an average of 5.9 UTI episodes per year. With estrogen treatment, that dropped to 0.5 episodes per year compared to 0.8 episodes per year with an antibiotic.

How Estrogen Impacts The Bladder

Despite the research that has already been completed around UTI and menopause, there is a lot that is still not understood about the link between estrogen and the urinary tract. And therefore the link between UTI and menopause.

First of all, we don’t know the effect that estrogen has on the bladder microbiome.

It’s one thing to demonstrate that estrogen in post-menopausal females may reduce the recurrence of UTI. It’s another thing entirely to completely understand why this happens, and the long-term impact of its use.

We do know that estrogen can improve the bladder epithelium (the lining of the bladder). But studies are still ongoing to see if estrogen has a similar effect on the bladder microbiome as we see with the vaginal microbiome.

Secondly, we don’t entirely understand how the Lactobacillus is getting access to the glycogen in the vaginal tract. So it is possible that estrogen is doing something other than simply providing a food source.

Thirdly, for women who go from a high diversity vaginal microbiome without estrogen to a Lactobacillus dominant microbiome on HRT, we don’t know where the Lactobacillus is coming from. How is it getting re-populated?

Finally, we don’t know why some women who have perfectly good estrogen levels still get UTIs.

Is Estrogen Cream Safe?

As with all medications, the first thing you need to do is check with your doctor. Based on your medical history and risk factors, estrogen therapy may not be the best choice for you.

However, for the majority of people, a topically applied cream or pessary is perfectly safe. These forms of medication keep the hormones to a localized area, so carry fewer risks than a pill (which circulates the hormones throughout your body).

Watch our interview with Dr. Rachel Rubin on vaginal estrogen therapy to learn more about safety, efficacy and long term benefits:

For those who experience recurrent UTI post-menopause, it may be worth raising the topic of estrogen therapy with your doctor.

We’ve linked the references for this article above, so you can review any relevant studies and share them with your doctor if you’d like to.

For pre-menopausal sufferers of recurrent UTI, the link between the vaginal and urinary microbiomes is still likely to be important.

For this reason, we’ve covered current research into the use of vaginal probiotics for recurrent UTI, and we’re working on some content specifically about this topic.

It’s also significant that a link between hormones and recurrent UTI has been established. We look forward to further research that will help enlighten us on how this link may impact pre-menopausal sufferers of recurrent UTI.

Learn more about UTI and hormones in our expert video series.

If you have questions or comments about UTI and menopause, you’re welcome to share them below. To get answers to other commonly asked questions about chronic and recurrent UTI, visit our FAQ page.

Ask Questions. Tell Stories

  1. I was just diagnosed with pelvic prolapse. Which aggravates my tendency to get UTIs I think. Trying physical therapy for the prolapse. The E-String estrogen causes pelvic pain and had a reaction to the estrogen cream. Are there natural bioidentical estrogens that can help?

    1. Hi Jan, we have heard from a handful of people that switching to a different cream has helped, however, it’s always best to speak with your clinician about alternatives. Melissa

    1. Hi Catherine, that is a really great question. As far as we know there hasn’t been any work done regarding estrogen dominance and the microbiome. We’ll certainly keep an eye out for new research in this space and let you know if we find anything! Susy

  2. My urologist would like me to start Hiprex for frequent UTI’s. I am skeptical about drug as heard it turns urine to formaldehyde? Any comments about this drug?

    1. Hi Jean, it is true that Hiprex goes through a process that forms formaldehyde in the urine, and that this contributes to its known antimicrobial properties. Hiprex is commonly used as part of one long term treatment protocol utilised in the UK. I just sent you an email with some notes on this. I hope it helps. Melissa

    2. Melissa, Can you please send me the info on Hiprex as well? I am on it, and it concerns me. Also, for what it’s worth, I reacted strongly (passed out) to the estrogen cream when applied into the vagina with an applicator. I just had a urogynocologist advise me to apply a dab twice a week around my urethra instead. Hope this will work!

  3. Hi
    I am post menopausal, have BV and IC with a high PH in my vagina. My IC symptoms are lower abdominal pain and severe urethral burning. I am due to do the urine broth test next month to check for embedded bacteria . I have discussed oestrogen therapy with my specialist ( Dr Anderson, I live in the UK) who has said it is my choice whether to start this before the broth test. I am very unsure what to do first, oestrogen or treatment for bacteria, if found ? Any thoughts ?
    Thanks very much
    Susan

  4. I am using estriol/ovestin cream. How long can I use it and can I use it everyday? I have been having recurrent UTIs. Thanks

  5. I suffer from recurring UTIs. My question is: how long can I safely continue using Hormone therapy if I apply it daily

  6. I have at least a 15 year history of recurrent uti’s and have tried everything. The only long periods without infection have been when I am on a long term low dose antibiotic but as soon as I stop the uti’s return. I am currently on macrobid which my ob feels is safe because it mainly effects the bladder and not the whole body. I am also on Premarin applied to the urethra. I have been feeling great the past few months but read that low dose antibiotics have bad effects over time. Can you comment on this strategy?

      1. Hi Pat, we do hear from some people that antibiotics cause digestive issues for them, however it varies from person to person, so it’s best to work with a practitioner through your options. If you’re looking for a practitioner, send us a direct message with your location and we can share some names. Susy

  7. I had recurrent UTIs for about 3 years after menopause. I started using Premarin vaginal estrogen cream and haven’t had a UTI since. It’s been at least four years since my last one. My question is, how long can I safely continue? I’m going to be turning 60 in a couple months. If I eventually stop using the HRT will the UTIs return? I’m not sure I could live through that again. I was getting them every 3 months, almost like clockwork. But, I don’t want to put my long term health in jeopardy.

  8. I’m desperate for help, these reoccurring UTI’s are taking over my life and making me miserable constantly. I’ll take an antibiotic, feel good and then it’s back again, try another regimen of antibiotics and back. Sometimes I’ll go for a routine checkup and won’t have symptoms but a uti shows up anyways. I’ve had a bladder lift 10 years ago. I’m 51 and have been in menopause for a while.

      1. I am wondering of any more holistic ways to treat infections. Currently with a bad bug Klebsella Pneumonae.. I have been on and off abx this year which I feel has killed my gut.. Looking for hope… also of any success stories with the use of tge Urmune vaccine

        1. Hi Shannon, we aren’t aware of how the Uromune vaccine can be accessed in the US. If you have information on that can you please let us know by direct message? Many people will be interested. We have heard some success stories with the vaccine from Europe. I saw you also sent us an email so I’ve replied there with more information. Melissa

  9. Hi,
    Thanks so much for the great article. Since menopause I unfortunately suffer from UTIs, mostly after intercourse. I try to stay away from antibiotics and use D mannose which helps me quite a bit. I’m wondering if probiotic pills would also be helpful as a preventative measure?